基因数据处理52之cs-bwamem集群版运行（1千万条100bp的reads）

（2）合并前后数据展示：

hadoop@Master:~$ hadoop fs -du -h /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/0
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/1
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/10
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/100
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/101
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/102
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/103
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/104
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/105
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/106
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/107
9.6 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/108
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/109
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/11
9.7 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/110
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/111
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/112
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/113
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/114
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/115
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/116
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/117
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/118
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/119
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/12
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/120
10.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/121
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/122
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/123
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/124
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/125
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/126
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/127
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/128
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/129
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/13
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/130
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/131
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/132
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/133
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/134
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/135
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/136
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/137
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/138
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/139
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/14
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/140
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/141
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/142
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/143
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/144
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/145
10.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/146
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/147
1.6 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/148
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/15
9.7 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/16
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/17
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/18
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/19
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/2
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/20
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/21
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/22
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/23
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/24
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/25
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/26
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/27
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/28
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/29
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/3
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/30
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/31
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/32
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/33
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/34
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/35
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/36
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/37
10.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/38
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/39
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/4
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/40
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/41
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/42
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/43
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/44
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/45
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/46
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/47
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/48
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/49
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/5
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/50
10.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/51
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/52
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/53
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/54
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/55
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/56
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/57
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/58
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/59
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/6
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/60
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/61
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/62
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/63
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/64
9.7 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/65
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/66
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/67
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/68
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/69
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/7
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/70
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/71
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/72
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/73
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/74
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/75
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/76
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/77
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/78
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/79
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/8
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/80
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/81
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/82
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/83
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/84
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/85
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/86
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/87
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/88
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/89
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/9
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/90
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/91
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/92
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/93
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/94
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/95
10.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/96
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/97
9.9 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/98
9.8 M   /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.adam/99
hadoop@Master:~$ hadoop fs -du -h /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam
du: `/xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam': No such file or directory
hadoop@Master:~$ hadoop fs -du -h /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam
0      /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/_SUCCESS
9.7 K  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/_common_metadata
1.6 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/_metadata
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00000.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00001.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00002.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00003.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00004.gz.parquet
4.0 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00005.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00006.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00007.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00008.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00009.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00010.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00011.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00012.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00013.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00014.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00015.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00016.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00017.gz.parquet
4.3 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00018.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00019.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00020.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00021.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00022.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00023.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00024.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00025.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00026.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00027.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00028.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00029.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00030.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00031.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00032.gz.parquet
4.2 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00033.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00034.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00035.gz.parquet
4.1 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00036.gz.parquet
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3.7 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00355.gz.parquet
3.7 M  /xubo/data/alignment/cs-bwamem/fastq/g38L100c10000000Nhs20.merge.adam/part-r-00356.gz.parquet
hadoop@Master:~$

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